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AT1G14810.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27943495 (2017): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23549413 (2013): plastid plastid stroma
  • PMID:22923678 (2012): plastid
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:14671022 (2004): mitochondrion
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : semialdehyde dehydrogenase family protein
Curator
Summary (TAIR10)
encodes an aspartate semialdehyde dehydrogenase, which produces the branch point intermediate for lysine and threonine/methionine biosynthesis
Computational
Description (TAIR10)
semialdehyde dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, aspartate-semialdehyde dehydrogenase activity; INVOLVED IN: cellular amino acid biosynthetic process, oxidation reduction, threonine biosynthetic process, methionine biosynthetic process, cellular amino acid metabolic process; LOCATED IN: mitochondrion, chloroplast stroma, chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Semialdehyde dehydrogenase, dimerisation domain (InterPro:IPR012280), Semialdehyde dehydrogenase, NAD-binding (InterPro:IPR000534), Aspartate-semialdehyde dehydrogenase, bacterial (InterPro:IPR005986), Aspartate-semialdehyde dehydrogenase (InterPro:IPR012080); Has 10268 Blast hits to 10266 proteins in 2514 species: Archae - 260; Bacteria - 6386; Metazoa - 3; Fungi - 175; Plants - 61; Viruses - 0; Other Eukaryotes - 3383 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G14810-MONOMERBioCyc:MetaCyc:AT1G14810-MONOMEReggNOG:COG0136eggNOG:KOG4777EMBL:AY070759EMBL:AY084493EMBL:AY101533
EMBL:CP002684EnsemblPlants:AT1G14810EnsemblPlants:AT1G14810.1entrez:838046Gene3D:3.40.50.720GeneID:838046GO:GO:0003942
GO:GO:0004073GO:GO:0005739GO:GO:0009086GO:GO:0009088GO:GO:0009089GO:GO:0009097GO:GO:0009507
GO:GO:0009536GO:GO:0009570GO:GO:0050661GO:GO:0051287Gramene:AT1G14810.1gramene_plant_reactome:1119295gramene_plant_reactome:1119419
gramene_plant_reactome:6876774gramene_plant_reactome:6877378HAMAP:MF_02121hmmpanther:PTHR10174hmmpanther:PTHR10174:SF2HOGENOM:HOG000013357IntAct:Q8VYI4
InterPro:IPR000534InterPro:IPR005986InterPro:IPR012080InterPro:IPR012280InterPro:IPR016040KEGG:00220+1.2.1.38KEGG:00260+1.2.1.11
KEGG:00261+1.2.1.11KEGG:00270+1.2.1.11KEGG:00300+1.2.1.11KEGG:ath:AT1G14810KO:K00133OMA:KWHKGIIPfam:PF01118
Pfam:PF02774PhylomeDB:Q8VYI4PIRSF:PIRSF000148Proteomes:UP000006548RefSeq:NP_172934.1SMART:SM00859SMR:Q8VYI4
STRING:3702.AT1G14810.1SUPFAM:SSF51735SUPFAM:SSF55347TAIR:AT1G14810TIGRfam:TIGR01296TIGRFAMs:TIGR01296UniGene:At.28249
UniGene:At.74964unipathway:UPA00034unipathway:UPA00050unipathway:UPA00051unipathway:UPA00068UniProt:Q8VYI4
Coordinates (TAIR10) chr1:-:5102684..5104633
Molecular Weight (calculated) 40748.00 Da
IEP (calculated) 7.00
GRAVY (calculated) -0.10
Length 375 amino acids
Sequence (TAIR10)
(BLAST)
001: MATFTHQTPQ THFLSRLPLR AKPRHFSARV KMSLQESAPS LAVVGVTGAV GQEFLSVLSD RDFPYSSIKM LASKRSAGKR VAFDGHEYTV EELTADSFNG
101: VDIALFSAGG SISKEFGPLA AEKGTIVVDN SSAFRMVDGV PLVIPEVNPE AMKGIKVGMG KGALIANPNC STIICLMAVT PLHHHAKVKR MVVSTYQAAS
201: GAGAAAMEEL VQQTREVLEG KPPTCNIFGQ QYAFNLFSHN APILDNGYNE EEMKLVKETR KIWNDTEVKV TATCIRVPVM RAHAESVNLQ FENPLDENTA
301: REILKKAPGV YIIDDRASNT FPTPLDVSNK DDVAVGRIRR DVSQDGNFGL DIFVCGDQIR KGAALNAVQI AEMLL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)