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AT1G11910.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
vacuole 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27122571 (2016): mitochondrion
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:22318864 (2012): plasma membrane
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
  • PMID:15539469 (2004): plant-type vacuole
  • PMID:15215502 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : aspartic proteinase A1
Curator
Summary (TAIR10)
Encodes an aspartic proteinase that forms a heterodimer and is stable over a broad pH range (ph 3-8).
Computational
Description (TAIR10)
aspartic proteinase A1 (APA1); FUNCTIONS IN: endopeptidase activity; INVOLVED IN: proteolysis, response to salt stress; LOCATED IN: vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Saposin-like (InterPro:IPR011001), Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Saposin-like type B, 1 (InterPro:IPR007856), Saposin-like type B, 2 (InterPro:IPR008138), Saposin B (InterPro:IPR008139), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Saposin-like aspartyl protease family protein (TAIR:AT1G62290.2); Has 7443 Blast hits to 5200 proteins in 420 species: Archae - 0; Bacteria - 2; Metazoa - 4134; Fungi - 1703; Plants - 675; Viruses - 0; Other Eukaryotes - 929 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G11910-MONOMERBioGrid:22980EC:3.4.23.-eggNOG:ENOG410XNV7eggNOG:KOG1339EMBL:AC002131EMBL:AY056387
EMBL:AY056403EMBL:AY063974EMBL:AY088657EMBL:BT001980EMBL:CP002684EMBL:U51036EnsemblPlants:AT1G11910
EnsemblPlants:AT1G11910.1entrez:837740Gene3D:1.10.225.10Gene3D:2.40.70.10GeneID:837740Genevisible:O65390GO:GO:0004175
GO:GO:0004190GO:GO:0005773GO:GO:0005829GO:GO:0006508GO:GO:0006629GO:GO:0009506GO:GO:0009651
GO:GO:0009735GO:GO:0030163Gramene:AT1G11910.1hmmpanther:PTHR13683hmmpanther:PTHR13683:SF286HOGENOM:HOG000197681InParanoid:O65390
IntAct:O65390InterPro:IPR001461InterPro:IPR001969InterPro:IPR007856InterPro:IPR008138InterPro:IPR008139InterPro:IPR011001
InterPro:IPR021109InterPro:IPR033121KEGG:ath:AT1G11910KO:K08245merops:A01.020OMA:KVERQVFPANTHER:PTHR13683
PaxDb:O65390Pfam:O65390Pfam:PF00026Pfam:PF03489Pfam:PF05184Pfscan:PS50015Pfscan:PS51767
PhylomeDB:O65390PIR:F86253PRIDE:O65390PRINTS:PR00792PRO:PR:O65390PROSITE:PS00141PROSITE:PS50015
PROSITE:PS51767ProteinModelPortal:O65390Proteomes:UP000006548Reactome:R-ATH-2132295RefSeq:NP_172655.1scanprosite:PS00141SMART:SM00741
SMR:O65390STRING:3702.AT1G11910.1SUPFAM:SSF47862SUPFAM:SSF50630TAIR:AT1G11910tair10-symbols:APA1tair10-symbols:ATAPA1
TMHMM:TMhelixUniGene:At.24544UniGene:At.67307UniProt:O65390
Coordinates (TAIR10) chr1:-:4017119..4019874
Molecular Weight (calculated) 54616.50 Da
IEP (calculated) 5.20
GRAVY (calculated) 0.04
Length 506 amino acids
Sequence (TAIR10)
(BLAST)
001: MKIYSRTVAV SLIVSFLLCF SAFAERNDGT FRVGLKKLKL DSKNRLAARV ESKQEKPLRA YRLGDSGDAD VVVLKNYLDA QYYGEIAIGT PPQKFTVVFD
101: TGSSNLWVPS SKCYFSLACL LHPKYKSSRS STYEKNGKAA AIHYGTGAIA GFFSNDAVTV GDLVVKDQEF IEATKEPGIT FVVAKFDGIL GLGFQEISVG
201: KAAPVWYNML KQGLIKEPVF SFWLNRNADE EEGGELVFGG VDPNHFKGKH TYVPVTQKGY WQFDMGDVLI GGAPTGFCES GCSAIADSGT SLLAGPTTII
301: TMINHAIGAA GVVSQQCKTV VDQYGQTILD LLLSETQPKK ICSQIGLCTF DGTRGVSMGI ESVVDKENAK LSNGVGDAAC SACEMAVVWI QSQLRQNMTQ
401: ERILNYVNEL CERLPSPMGE SAVDCAQLST MPTVSLTIGG KVFDLAPEEY VLKVGEGPVA QCISGFIALD VAPPRGPLWI LGDVFMGKYH TVFDFGNEQV
501: GFAEAA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)