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AT1G08520.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:27177187 (2016): nucleus
  • PMID:27122571 (2016): mitochondrion
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25587034 (2015): cytosol
  • PMID:24872594 (2014): plastid plastid thylakoid
  • PMID:24872594 (2014): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23549413 (2013): plastid plastid stroma
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:20061580 (2010): plastid plastid thylakoid
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ALBINA 1
Curator
Summary (TAIR10)
Encodes the CHLD subunit of the Mg-chelatase enzyme involved in chlorophyll biosynthesis. Lines carrying recessive mutations of this locus are white and seedling lethal.
Computational
Description (TAIR10)
ALBINA 1 (ALB1); FUNCTIONS IN: magnesium chelatase activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding; INVOLVED IN: chlorophyll biosynthetic process; LOCATED IN: magnesium chelatase complex, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Magnesium chelatase, ChlI subunit (InterPro:IPR000523), Magnesium chelatase, ATPase subunit D (InterPro:IPR011776), von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT4G18480.1); Has 11508 Blast hits to 8193 proteins in 1580 species: Archae - 212; Bacteria - 4110; Metazoa - 3314; Fungi - 479; Plants - 476; Viruses - 191; Other Eukaryotes - 2726 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G08520-MONOMERBioCyc:MetaCyc:AT1G08520-MONOMERBioGrid:22615EC:6.6.1.1eggNOG:COG1239eggNOG:COG1240eggNOG:ENOG410IJDJ
EMBL:AC006932EMBL:AF083555EMBL:AK226535EMBL:AK316801EMBL:AY059906EMBL:AY063821EMBL:AY091402
EMBL:AY114693EMBL:BT002406EMBL:CP002684EnsemblPlants:AT1G08520EnsemblPlants:AT1G08520.1entrez:837374Gene3D:3.40.50.300
Gene3D:3.40.50.410GeneID:837374Genevisible:Q9SJE1GO:GO:0005524GO:GO:0009507GO:GO:0009534GO:GO:0009570
GO:GO:0010007GO:GO:0015979GO:GO:0015995GO:GO:0016851Gramene:AT1G08520.1hmmpanther:PTHR10338hmmpanther:PTHR10338:SF126
HOGENOM:HOG000225092InParanoid:Q9SJE1InterPro:IPR000523InterPro:IPR002035InterPro:IPR003593InterPro:IPR011776InterPro:IPR027417
KEGG:00860+6.6.1.1KEGG:ath:AT1G08520KO:K03404ncoils:CoilOMA:MPCGGGSPaxDb:Q9SJE1Pfam:PF01078
Pfam:PF13519Pfam:Q9SJE1Pfscan:PS50234PhylomeDB:Q9SJE1PIR:B86218PRIDE:Q9SJE1PRO:PR:Q9SJE1
PROSITE:PS50234ProteinModelPortal:Q9SJE1Proteomes:UP000006548RefSeq:NP_563821.2SMART:SM00327SMART:SM00382SMR:Q9SJE1
STRING:3702.AT1G08520.1SUPFAM:SSF52540SUPFAM:SSF53300TAIR:AT1G08520tair10-symbols:ALB-1Vtair10-symbols:ALB1tair10-symbols:CHLD
tair10-symbols:PDE166tair10-symbols:V157TIGRfam:TIGR02031TIGRFAMs:TIGR02031UniGene:At.11572UniPathway:UPA00668UniProt:Q9SJE1
Coordinates (TAIR10) chr1:+:2696538..2700819
Molecular Weight (calculated) 83288.50 Da
IEP (calculated) 5.00
GRAVY (calculated) -0.33
Length 760 amino acids
Sequence (TAIR10)
(BLAST)
001: MAMTPVASSS PVSTCRLFRC NLLPDLLPKP LFLSLPKRNR IASCRFTVRA SANATVESPN GVPASTSDTD TETDTTSYGR QFFPLAAVVG QEGIKTALLL
101: GAVDREIGGI AISGRRGTAK TVMARGLHEI LPPIEVVVGS ISNADPACPD EWEDDLDERI EYNADNTIKT EIVKSPFIQI PLGVTEDRLI GSVDVEESVK
201: RGTTVFQPGL LAEAHRGVLY VDEINLLDEG ISNLLLNVLT DGVNIVEREG ISFRHPCKPL LIATYNPEEG AVREHLLDRV AINLSADLPM SFEDRVAAVG
301: IATQFQERCN EVFRMVNEET ETAKTQIILA REYLKDVKIS REQLKYLVLE AVRGGVQGHR AELYAARVAK CLAAIEGREK VTIDDLRKAV ELVILPRSSL
401: DETPPEQQNQ PPPPPPPPQN SESGEEENEE EQEEEEEDES NEENENEQQQ DQIPEEFIFD AEGGLVDEKL LFFAQQAQKR RGKAGRAKNV IFSEDRGRYI
501: KPMLPKGPVK RLAVDATLRA AAPYQKLRRE KDISGTRKVF VEKTDMRAKR MARKAGALVI FVVDASGSMA LNRMQNAKGA ALKLLAESYT SRDQVSIIPF
601: RGDAAEVLLP PSRSIAMARN RLERLPCGGG SPLAHGLTTA VRVGLNAEKS GDVGRIMIVA ITDGRANITL KRSTDPESIA PDAPRPTSKE LKDEILEVAG
701: KIYKAGMSLL VIDTENKFVS TGFAKEIARV AQGKYYYLPN ASDAVISATT RDALSDLKNS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)