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AT1G07450.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.738
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NAD(P)-binding Rossmann-fold superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Short-chain dehydrogenase/reductase, conserved site (InterPro:IPR020904), NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: tropinone reductase (TAIR:AT2G29330.1); Has 110061 Blast hits to 109928 proteins in 3503 species: Archae - 928; Bacteria - 73032; Metazoa - 4466; Fungi - 5399; Plants - 2523; Viruses - 2; Other Eukaryotes - 23711 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G07450-MONOMEREC:1.1.1.-eggNOG:COG1028eggNOG:KOG0725
EMBL:AC022464EMBL:AY090925EMBL:CP002684EnsemblPlants:AT1G07450
EnsemblPlants:AT1G07450.1entrez:837257Gene3D:3.40.50.720GeneID:837257
Genevisible:Q8RX32GO:GO:0016491Gramene:AT1G07450.1hmmpanther:PTHR24322
hmmpanther:PTHR24322:SF641IntAct:Q8RX32InterPro:IPR002347InterPro:IPR016040
InterPro:IPR020904KEGG:ath:AT1G07450KO:K08081OMA:NIAPEEW
PANTHER:PTHR24322PaxDb:Q8RX32Pfam:PF00106Pfam:Q8RX32
PhylomeDB:Q8RX32PRIDE:Q8RX32PRINTS:PR00080PRINTS:PR00081
PRO:PR:Q8RX32PROSITE:PS00061ProteinModelPortal:Q8RX32Proteomes:UP000006548
RefSeq:NP_172225.1scanprosite:PS00061SMR:Q8RX32STRING:3702.AT1G07450.1
SUPFAM:SSF51735TAIR:AT1G07450UniGene:At.16717UniGene:At.42300
UniProt:Q8RX32
Coordinates (TAIR10) chr1:-:2288038..2289256
Molecular Weight (calculated) 27897.40 Da
IEP (calculated) 5.04
GRAVY (calculated) 0.21
Length 260 amino acids
Sequence (TAIR10)
(BLAST)
001: MDINRWSLQG MTALVTGGSK GIGYAIVEEL VGFGARVHIC DIDETLLNEC LSGWHAKGFE VSGSICDVSS RPQRVQLMQT VSSLFGAKLN ILINNVGKYI
101: LKPTLESTAE DFSSLMATNL ESAYYISQLA HPLLKASGNG NIVFISSVTG VVSGTSTIYG VTKGALNQLA RDLACEWASD NIRANSVAPW VTATSLVQKY
201: LEDEIFAEAM FSRTPLGRAC EPREVASLVT FLCLPAASYI TGQTICIDGG FTVNGFSYKP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)