AT1G03090.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
|
||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||
| Description (TAIR10) | protein_coding : methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA) | ||||||||||||||||
| Curator Summary (TAIR10) |
MCCA is the biotinylated subunit of the dimer MCCase, which is involved in leucine degradation. Both subunits are nuclear coded and the active enzyme is located in the mitochondrion. | ||||||||||||||||
| Computational Description (TAIR10) |
MCCA; FUNCTIONS IN: cobalt ion binding, methylcrotonoyl-CoA carboxylase activity; INVOLVED IN: leucine catabolic process; LOCATED IN: mitochondrion, cytosolic ribosome; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Single hybrid motif (InterPro:IPR011053), Biotin/lipoyl attachment (InterPro:IPR000089), Carbamoyl phosphate synthase, large subunit, N-terminal (InterPro:IPR005481), Carbamoyl phosphate synthetase, large subunit, ATP-binding (InterPro:IPR005479), PreATP-grasp-like fold (InterPro:IPR016185), Biotin-binding site (InterPro:IPR001882), Biotin carboxylation domain (InterPro:IPR011764), Biotin carboxylase, C-terminal (InterPro:IPR005482), ATP-grasp fold (InterPro:IPR011761), ATP-grasp fold, subdomain 2 (InterPro:IPR013816), Rudiment single hybrid motif (InterPro:IPR011054), Pre-ATP-grasp fold (InterPro:IPR013817); BEST Arabidopsis thaliana protein match is: acetyl Co-enzyme a carboxylase biotin carboxylase subunit (TAIR:AT5G35360.1); Has 35200 Blast hits to 30603 proteins in 3073 species: Archae - 603; Bacteria - 22615; Metazoa - 922; Fungi - 892; Plants - 784; Viruses - 0; Other Eukaryotes - 9384 (source: NCBI BLink). | ||||||||||||||||
| Protein Annotations |
|
||||||||||||||||
| Coordinates (TAIR10) | chr1:+:739715..743819 | ||||||||||||||||
| Molecular Weight (calculated) | 78373.40 Da | ||||||||||||||||
| IEP (calculated) | 6.78 | ||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||
| Length | 714 amino acids | ||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSMMTVWALR RNVRRKNHSM LVRYISGSAS MKPKEQCIEK ILVANRGEIA CRIMRTAKRL GIQTVAVYSD ADRDSLHVKS ADEAVRIGPP SARLSYLSGV 101: TIMEAAARTG AQAIHPGYGF LSESSDFAQL CEDSGLTFIG PPASAIRDMG DKSASKRIMG AAGVPLVPGY HGHEQDIDHM KSEAEKIGYP IIIKPTHGGG 201: GKGMRIVQSG KDFADSFLGA QREAAASFGV NTILLEKYIT RPRHIEVQIF GDKHGNVLHL YERDCSVQRR HQKIIEEAPA AVGYYNAGTV EFIVDTESDQ 301: FYFMEMNTRL QVEHPVTEMI VGQDLVEWQI RVANGEPLPL SQSEVPMSGH AFEARIYAEN VPKGFLPATG VLNHYRPVAV SPSVRVETGV EQGDTVSMHY 401: DPMIAKLVVW GGNRGEALVK LKDCLSNFQV AGVPTNINFL QKLASHKEFA VGNVETHFIE HHKSDLFADE SNPAATEVAY KAVKHSAALV AACISTIEHS 501: TWNESNHGKV PSIWYSNPPF RVHHEAKQTI ELEWNNECEG TGSNLISLGV RYQPDGSYLI EEGNDSPSLE LRVTRAGKCD FRVEAAGLSM NVSLAAYLKD 601: GYKHIHIWHG SEHHQFKQKV GIEFSEDEEG VQHRTSSETS SHPPGTIVAP MAGLVVKVLV ENEAKVDQGQ PILVLEAMKM EHVVKAPSSG SIQDLKVKAG 701: QQVSDGSALF RIKG |
||||||||||||||||
| See Also |
|
||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)