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AT1G02280.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
  • PMID:21531424 (2011): plastid
  • PMID:20061580 (2010): plastid plastid envelope
  • PMID:19334764 (2009): plasma membrane
  • PMID:18431481 (2008): plastid plastid envelope
  • PMID:12938931 (2003): plastid
  • PMID:12766230 (2003): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : translocon at the outer envelope membrane of chloroplasts 33
Curator
Summary (TAIR10)
Encodes a GTP-binding GTP-ase. Component of the chloroplast protein import machinery. Required for import of POR B into plastids. Toc33 phosphorylation may not play an important role in vivo.
Computational
Description (TAIR10)
translocon at the outer envelope membrane of chloroplasts 33 (TOC33); FUNCTIONS IN: protein binding, GTP binding, GTPase activity, protein homodimerization activity; INVOLVED IN: protein targeting to chloroplast; LOCATED IN: chloroplast outer membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: AIG1 (InterPro:IPR006703), Chloroplast protein import component Toc34 (InterPro:IPR005688); BEST Arabidopsis thaliana protein match is: translocon at the outer envelope membrane of chloroplasts 34 (TAIR:AT5G05000.1); Has 1041 Blast hits to 1035 proteins in 244 species: Archae - 0; Bacteria - 399; Metazoa - 251; Fungi - 18; Plants - 325; Viruses - 0; Other Eukaryotes - 48 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT1G02280-MONOMERBioGrid:24483BRENDA:3.6.5.2DNASU:839248EC:3.6.5.-eggNOG:ENOG410IERBeggNOG:ENOG410ZHTP
EMBL:AJ010724EMBL:AY042869EMBL:AY056448EMBL:BT025654EMBL:CP002684EMBL:U89959EnsemblPlants:AT1G02280
EnsemblPlants:AT1G02280.1EnsemblPlants:AT1G02280.2entrez:839248EvolutionaryTrace:O23680Gene3D:3.40.50.300GeneID:839248Genevisible:O23680
GO:GO:0003924GO:GO:0005525GO:GO:0009507GO:GO:0009707GO:GO:0009941GO:GO:0015450GO:GO:0016021
GO:GO:0042802GO:GO:0042803GO:GO:0045036GO:GO:0046872Gramene:AT1G02280.1Gramene:AT1G02280.2hmmpanther:PTHR10903
HOGENOM:HOG000264764InParanoid:O23680IntAct:O23680InterPro:IPR005688InterPro:IPR006703InterPro:IPR027417iPTMnet:O23680
KEGG:ath:AT1G02280OMA:FPAATQEPaxDb:O23680PDB:2J3EPDB:3BB3PDB:3BB4PDB:3DEF
PDBsum:2J3EPDBsum:3BB3PDBsum:3BB4PDBsum:3DEFPfam:O23680Pfam:PF04548Pfscan:PS51720
PhylomeDB:O23680PIRSF:PIRSF038134PRIDE:O23680PRO:PR:O23680PROSITE:PS51720ProteinModelPortal:O23680Proteomes:UP000006548
RefSeq:NP_001117215.1RefSeq:NP_171730.1SMR:O23680STRING:3702.AT1G02280.1SUPFAM:SSF52540TAIR:AT1G02280tair10-symbols:ATTOC33
tair10-symbols:PPI1tair10-symbols:TOC33TIGRfam:TIGR00991TIGRFAMs:TIGR00991UniGene:At.10710UniGene:At.70625UniProt:O23680
Coordinates (TAIR10) chr1:-:448665..450246
Molecular Weight (calculated) 32927.10 Da
IEP (calculated) 9.59
GRAVY (calculated) -0.14
Length 297 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSLVREWVG FQQFPAATQE KLIEFFGKLK QKDMNSMTVL VLGKGGVGKS STVNSLIGEQ VVRVSPFQAE GLRPVMVSRT MGGFTINIID TPGLVEAGYV
101: NHQALELIKG FLVNRTIDVL LYVDRLDVYR VDELDKQVVI AITQTFGKEI WCKTLLVLTH AQFSPPDELS YETFSSKRSD SLLKTIRAGS KMRKQEFEDS
201: AIAVVYAENS GRCSKNDKDE KALPNGEAWI PNLVKAITDV ATNQRKAIHV DKKMVDGSYS DDKGKKLIPL IIGAQYLIVK MIQGAIRNDI KTSGKPL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)