About SUBA3
The SubCellular Proteomic Database (SUBA3) houses large scale proteomic and GFP localisation sets from cellular compartments of Arabidopsis. It also contains precompiled bioinformatic predictions for protein subcellular localisations. A new dataset of protein-protein interactions has recently been added.
AT5G47840.1
Subcellular Localization

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SUBAcon:
plastid 1.000
Predictors Annotations GFP MS/MS PPI GFP Images
AdaBoost : nucleus
ATP : no data
BaCelLo : plastid
ChloroP : no data
EpiLoc : plastid
iPSORT : plastid
MitoPred : no data
Mitoprot 2 : mitochondrion
MultiLoc : plastid
Nucleo : no data
PCLR : plastid
Plant-mPloc : plastid
Predotar : plastid
PredSL : plastid
PProwler : plastid
PTS1 : no data
SLPFA : plastid
SLP-Local : plastid
SubLoc : nucleus
TargetP : plastid
WoLF PSORT : plastid
YLoc : plastid
 AmiGO: no localisation data
SwissProt : plastid
TAIR : plastid: 18633119
TAIR : plastid: 18431481
 no data plastid : 21531424
plastid : 20423899
plastid : 20061580
plastid : 18633119
plastid : 18431481
plastid : 16207701
 no images
Description (TAIR10) protein_coding :adenosine monophosphate kinase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)		 adenosine monophosphate kinase (AMK2); FUNCTIONS IN: nucleobase, nucleoside, nucleotide kinase activity, nucleotide kinase activity, ATP binding, adenylate kinase activity, phosphotransferase activity, phosphate group as acceptor; INVOLVED IN: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process, anaerobic respiration, nucleotide metabolic process; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Adenylate kinase, active site lid domain (InterPro:IPR007862), Adenylate kinase, subfamily (InterPro:IPR006259), Adenylate kinase (InterPro:IPR000850); BEST Arabidopsis thaliana protein match is: adenylate kinase family protein (TAIR:AT5G35170.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Coordinates (TAIR10) chr5:+:19375488..19378058
Molecular Weight (calculated) 31453.6 Da
IEP (calculated) 7.73
GRAVY (calculated) -0.4
Length 282 amino acids
Sequence (TAIR10)
(BLAST) 		MTGCVNSI SPPPVTLY RHRASPSR SSFSLSGD ALHSLYRH RRVSRSPS IIAPKFQI VAAEKSEP LKIMISGA PASGKGTQ CELITHKY GLVHISAG DLLRAEIA SGSENGRR AKEHMEKG QLVPDEIV VMMVKDRL SQTDSEQK GWLLDGYP RSASQATA LKGFGFQP DLFIVLEV PEEILIER VVGRRLDP VTGKIYHL KYSPPETE EIAVRLTQ RFDDTEEK AKLRLKTH NQNVSDVL SMYDDITI KIEGNRSK EEVFAQID SSLSELLQ ERNTAPSS LLS
Hydropathy Plot
(raw data) 		Hydropathy plot AT5G47840.1
See Also Aramemnon AtProteome DBGET Inparanoid MIPS MPSS Plus PPDB PlantSpecDB ProMEX Proteins Wiki SALK (inserts) SALK (signal) TAIR SwissProt

Citation
If you find this resource useful please cite one of the following publications:
Tanz SK, Castleden I, Hooper CM, Vacher M, Small I; Millar, AH (2013) SUBA3: a database for integrating experimentation and prediction to define the SUBcellular location of proteins in Arabidopsis. Nucleic Acids Res. 41: D1185-91 (Nucleic Acids Res.) (PubMed)
  Heazlewood JL, Verboom RE, Tonti-Filippini J, Small I and Millar AH. (2007) SUBA: the Arabidopsis Subcellular Database. Nucleic Acids Res. 35(D):213-218. (PubMed)
  Heazlewood JL, Tonti-Filippini J, Verboom RE, Millar AH. (2005) Combining experimental and predicted datasets for determination of the subcellular location of proteins in Arabidopsis. Plant Physiol. 139(2):598-609. (PubMed)