About SUBA3
The SubCellular Proteomic Database (SUBA3) houses large scale proteomic and GFP localisation sets from cellular compartments of Arabidopsis. It also contains precompiled bioinformatic predictions for protein subcellular localisations. A new dataset of protein-protein interactions has recently been added.
AT3G63490.1
Subcellular Localization

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SUBAcon:
plastid 1.000

Gold Standard: plastid
Predictors Annotations GFP MS/MS PPI GFP Images
AdaBoost : cytosol
ATP : no data
BaCelLo : plastid
ChloroP : plastid
EpiLoc : nucleus
iPSORT : plastid
MitoPred : no data
Mitoprot 2 : mitochondrion
MultiLoc : plastid
Nucleo : no data
PCLR : plastid
Plant-mPloc : plastid
Predotar : plastid
PredSL : plastid
PProwler : plastid
PTS1 : no data
SLPFA : mitochondrion
SLP-Local : plastid
SubLoc : mitochondrion
TargetP : plastid
WoLF PSORT : plastid
YLoc : plastid
 AmiGO : nucleus: 14617066
AmiGO : plastid: 15028209
AmiGO : plastid: 15322131
AmiGO : plastid: 16207701
AmiGO : plastid: 18431481
AmiGO : plastid: 18633119
SwissProt : plastid
TAIR : plastid: 15028209
TAIR : nucleus: 14617066
TAIR : plastid: 18633119
TAIR : plastid: 18431481
TAIR : plastid: 15322131
 no data nucleus : 23396599
nucleus : 14617066
plasma membrane : 19334764
plastid : 21531424
plastid : 20423899
plastid : 20061580
plastid : 18633119
plastid : 18431481
plastid : 16207701
plastid : 15322131
plastid : 15028209
 no images
Description (TAIR10) protein_coding :Ribosomal protein L1p/L10e family
Curator
Summary (TAIR10)
Computational
Description (TAIR10)		 Ribosomal protein L1p/L10e family; FUNCTIONS IN: structural constituent of ribosome, RNA binding; INVOLVED IN: translation, RNA processing; LOCATED IN: in 6 components; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein L1 (InterPro:IPR002143), Ribosomal protein L1, bacterial-type (InterPro:IPR005878), Ribosomal protein L1, 2-layer alpha/beta-sandwich (InterPro:IPR016094); BEST Arabidopsis thaliana protein match is: Ribosomal protein L1p/L10e family (TAIR:AT2G42710.1); Has 9168 Blast hits to 9162 proteins in 2816 species: Archae - 276; Bacteria - 5341; Metazoa - 152; Fungi - 277; Plants - 105; Viruses - 0; Other Eukaryotes - 3017 (source: NCBI BLink).
Coordinates (TAIR10) chr3:+:23444269..23446020
Molecular Weight (calculated) 37634.5 Da
IEP (calculated) 9.9
GRAVY (calculated) -0.24
Length 345 amino acids
Sequence (TAIR10)
(BLAST) 		MAACATHS SLMLAYAA ASTRSQDL TPTPSLFS FASSRPNH LSFPLLLL GGSRDRRC AAIDRASN HKFIVSAV AAEADLDT EEDLEQTA TAVLDPPK PKKGKAAL VLKRDRTR SKRFLEIQ KLRETKKE YDVNTAIS LLKQTANT RFVESVEA HFRLNIDP KYNDQQLR ATVSLPKG TGQTVIVA VLAQGEKV DEAKSAGA DIVGSDDL IEQIKGGF MEFDKLIA SPDMMVKV AGLGKILG PRGLMPNP KAGTVTAN IPQAIEEF KKGKVEFR ADKTGIVH IPFGKVNF TEEDLLIN FLAAVKSV ETNKPKGA KGVYWKSA HICSSMGP SIKLNIRE MIDFKPPT AN
Hydropathy Plot
(raw data) 		Hydropathy plot AT3G63490.1
See Also Aramemnon AtProteome DBGET Inparanoid MIPS MPSS Plus PPDB PlantSpecDB ProMEX Proteins Wiki SALK (inserts) SALK (signal) TAIR SwissProt

Citation
If you find this resource useful please cite one of the following publications:
Tanz SK, Castleden I, Hooper CM, Vacher M, Small I; Millar, AH (2013) SUBA3: a database for integrating experimentation and prediction to define the SUBcellular location of proteins in Arabidopsis. Nucleic Acids Res. 41: D1185-91 (Nucleic Acids Res.) (PubMed)
  Heazlewood JL, Verboom RE, Tonti-Filippini J, Small I and Millar AH. (2007) SUBA: the Arabidopsis Subcellular Database. Nucleic Acids Res. 35(D):213-218. (PubMed)
  Heazlewood JL, Tonti-Filippini J, Verboom RE, Millar AH. (2005) Combining experimental and predicted datasets for determination of the subcellular location of proteins in Arabidopsis. Plant Physiol. 139(2):598-609. (PubMed)