About SUBA3
The SubCellular Proteomic Database (SUBA3) houses large scale proteomic and GFP localisation sets from cellular compartments of Arabidopsis. It also contains precompiled bioinformatic predictions for protein subcellular localisations. A new dataset of protein-protein interactions has recently been added.
AT1G19740.1
Subcellular Localization

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SUBAcon:
plastid 1.000
Predictors Annotations GFP MS/MS PPI GFP Images
AdaBoost : cytosol
ATP : no data
BaCelLo : plastid
ChloroP : plastid
EpiLoc : no data
iPSORT : plastid
MitoPred : mitochondrion
Mitoprot 2 : mitochondrion
MultiLoc : plastid
Nucleo : no data
PCLR : plastid
Plant-mPloc : no data
Predotar : plastid
PredSL : plastid
PProwler : plastid
PTS1 : no data
SLPFA : plastid
SLP-Local : plastid
SubLoc : nucleus
TargetP : plastid
WoLF PSORT : plastid
YLoc : plastid
 AmiGO : plastid: 18431481
SwissProt: no localisation data
TAIR : plastid: 18431481
 plastid : 19224954
 plastid : 21531424
plastid : 20061580
 AT3G59300.1 : 21798944
 no images
Description (TAIR10) protein_coding :ATP-dependent protease La (LON) domain protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)		 ATP-dependent protease La (LON) domain protein; FUNCTIONS IN: ATP-dependent peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S16, lon N-terminal (InterPro:IPR003111); BEST Arabidopsis thaliana protein match is: ATP-dependent protease La (LON) domain protein (TAIR:AT1G75460.1); Has 3644 Blast hits to 3644 proteins in 880 species: Archae - 0; Bacteria - 1707; Metazoa - 175; Fungi - 37; Plants - 117; Viruses - 0; Other Eukaryotes - 1608 (source: NCBI BLink).
Coordinates (TAIR10) chr1:+:6824396..6825232
Molecular Weight (calculated) 31372.7 Da
IEP (calculated) 8.31
GRAVY (calculated) -0.3
Length 277 amino acids
Sequence (TAIR10)
(BLAST) 		MALPSTVS SPSFKSTP PYLSAFNP KPLHLPAT YRSINRRS CKLLSFRC SSSSFSEK HHNNANPP KSDDLVEL PLFPLPLV LFPGATIP LQIFEFRY RVMMQTLL QSDLRFGV VYSDAVSG SAAGIGCV GEIVKHER LVDDRFFL ICKGQERF RVTDLVRT KPYLVAKV TWLEDRPS GEENLDEL ANEVEVLM KEVIRLSN RLNGKPDK ESQDLRKN QFPTPFSF FVGSTFEG APMEQQAL LELEDTAA RLKRERET LRNTLNYL TAASAVKD VFPSQP
Hydropathy Plot
(raw data) 		Hydropathy plot AT1G19740.1
See Also Aramemnon AtProteome DBGET Inparanoid MIPS MPSS Plus PPDB PlantSpecDB ProMEX Proteins Wiki SALK (inserts) SALK (signal) TAIR SwissProt

Citation
If you find this resource useful please cite one of the following publications:
Tanz SK, Castleden I, Hooper CM, Vacher M, Small I; Millar, AH (2013) SUBA3: a database for integrating experimentation and prediction to define the SUBcellular location of proteins in Arabidopsis. Nucleic Acids Res. 41: D1185-91 (Nucleic Acids Res.) (PubMed)
  Heazlewood JL, Verboom RE, Tonti-Filippini J, Small I and Millar AH. (2007) SUBA: the Arabidopsis Subcellular Database. Nucleic Acids Res. 35(D):213-218. (PubMed)
  Heazlewood JL, Tonti-Filippini J, Verboom RE, Millar AH. (2005) Combining experimental and predicted datasets for determination of the subcellular location of proteins in Arabidopsis. Plant Physiol. 139(2):598-609. (PubMed)